Searchable Reference Data Built for Nexus Integration
Nexus DB is an invaluable resource and included with all Nexus Copy Number subscriptions.
Features And Benefits
Store your own data
As a Nexus user, you can use NexusDB to store your own data, privately. Data is secured off-site using Amazon’s AWS platform.
Reference Data
Query by gene or region of interest to quickly find samples and clinical annotations, with the ability to compare data generated by different aCGH, SNP array, and NGS platforms.
Reference Data in Nexus DB
Ability to share your own data easily with the people you choose and collaborate across the globe.
Available Data in Nexus DB
Constitutional Genetics
AGRE – Autism Genetic Research Exchange. All data available in both HG18 and HG19 genome builds.
ISCA/ICCG (dbVAR) – Structural variation (SV) database of genomic variants with clinical annotations for a broad range of constitutional genetic disorders.
Affymetrix CytoScan HD Reference Project – 375 normal samples used to create the CytoScan HD reference file
Cancer
TCGA Premier – reprocessed and manually curated TCGA data, resulting in dramatically increased fidelity and corresponding reduction in false-positive calls.
Datasets include Acute Myeloid Leukemia, Glioblastoma (GBM), Ovarian Serous Cyst adenocarcinoma, Kidney Renal Clear Cell Carcinoma, Colon Adenocarcinoma, Lung squamous carcinoma, and more.