Control software 3DView

medical3D2D

Overview
Explore tissue structures in 3D using 3DView. The software converts 2D serial sections, confocal Z-stacks and micro-CT datasets into interactive 3D reconstructions with SlideMatch alignment for rotation, zoom and arbitrary slicing.

Key features

• Interactive 3D reconstruction from 2D serial sections and Z-stack slides.
• Support for micro-CT datasets (VOL/VGI formats).
• SlideMatch alignment enabling rotation, zoom and arbitrary slicing through volumes.
• Image controls: brightness, contrast, gamma, RGB channel control and multi-stain editing.
• Metric measurement tools for distance assessment within 3D models.
• Export options: 2D image series, full 3D volumes, channel selection, alignment and magnification settings; high-resolution video and snapshot exports.
• Wide compatibility with major whole slide imaging formats.

Supported data and workflows

• 2D serial section stacks → 3D reconstructions.
• Z-stack (confocal) slides → 3D volume rendering.
• Micro-CT datasets (VOL/VGI) → integration and virtual coloring.

Compatibility

• Supported whole slide image formats: MRXS (3DHISTECH), SVS (Leica Aperio), CZI (Zeiss), NDP (Hamamatsu), VSI (Olympus).

Precision & export

• Tools for accurate metric distance assessment within 3D reconstructions.
• Export as 2D image sequences or complete 3D volumes with control over channels, alignment and magnification.
• High-resolution video and snapshot exports suitable for presentations and publications.

Technical specifications

• Product name: 3DView
• Functionality: 3D reconstruction of 2D serial sections, Z-stack to volume rendering, micro-CT (VOL/VGI) support, SlideMatch alignment, measurement tools, export to 2D/3D and video.
• Supported image formats: MRXS, SVS, CZI, NDP, VSI (and other major whole slide imaging formats).
• System requirements: OS: Windows 7 SP1, 8, 8.1 or 10 (64-bit). GPU: OpenGL 3.3 capable (dedicated video memory 512 MB minimum, 1 GB recommended) from vendors such as AMD/ATI, Barco, Intel or NVIDIA. CPU: Intel Core i7 or comparable. RAM: 4 GB minimum, 8 GB recommended.
• Input types: 2D serial sections, confocal Z-stacks, micro-CT VOL/VGI.